PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS714362.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 146aa    MW: 16862.4 Da    PI: 7.7634
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS714362.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.51.4e-1955139191
                   EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
            B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                   f+k++++s+v++  +l lp +f++ h+  +++++t+tlede+g ++ v++i++k+     l++GWk+F +a +L egD++vF+l++ s f+
  EcS714362.10  55 FLKTMVRSNVTTGFWLHLPMPFCKLHM--PRNNITVTLEDENGDEYPVNYIVDKTA----LSAGWKKFSSARELMEGDVLVFQLVRASVFK 139
                   89*********************9997..56889****************888887....************************9988884 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.106.0E-2149143IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.28E-2451144IPR015300DNA-binding pseudobarrel domain
CDDcd100177.54E-2653143No hitNo description
PROSITE profilePS5086312.50655146IPR003340B3 DNA binding domain
PfamPF023628.0E-1755139IPR003340B3 DNA binding domain
SMARTSM010196.7E-1955146IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
TMHEQVASTY HRETKRQKRL VIDDLYHYDH VGGKSPAMER AEEFRANLPA EIPSFLKTMV  60
RSNVTTGFWL HLPMPFCKLH MPRNNITVTL EDENGDEYPV NYIVDKTALS AGWKKFSSAR  120
ELMEGDVLVF QLVRASVFKV TPFVFV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028536.14e-98PREDICTED: B3 domain-containing protein Os01g0234100-like
TrEMBLA0A059AMR83e-70A0A059AMR8_EUCGR; Uncharacterized protein
STRINGPOPTR_0004s14900.11e-45(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM167171012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-31B3 family protein